ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9SNB7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9SNB7_F1_nD2

Q9SNB7_F1_nD2

UID: 003810717

AlphaFold

Range: 421-660
AlphaFold: AF-Q9SNB7
UniProt: Q9SNB7 (all domains)
Gene: LPE1

Protein: Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3, PPR_long →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3, PPR_long(109.4.1.1260)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

PF17177PPR_long

Pentacotripeptide-repeat region of PRORP

ClanCL0020TPR

External Links

AlphaFold DB: Q9SNB7 UniProt: Q9SNB7

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-660