ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q0WQJ3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0WQJ3_F1_nD1

Q0WQJ3_F1_nD1

UID: 003811655

AlphaFold

Range: 21-435
AlphaFold: AF-Q0WQJ3
UniProt: Q0WQJ3 (all domains)
Gene: AVT6D

Protein: Amino acid transporter AVT6D (AtAvt6D)

3D Structure

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Related Domains

Browse other domains in Aa_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyAa_trans(5051.1.1.6)

Pfam Families

PF01490Aa_trans

Transmembrane amino acid transporter protein

ClanCL0062APC

External Links

AlphaFold DB: Q0WQJ3 UniProt: Q0WQJ3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-435