ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q42400_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q42400_F1_nD1

Q42400_F1_nD1

UID: 003811770

AlphaFold

Range: 36-360,386-470
AlphaFold: AF-Q42400
UniProt: Q42400 (all domains)
Gene: AAP1

Protein: Amino acid permease 1 (Amino acid transporter AAP1) (Neutral amino acid transporter II)

3D Structure

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Related Domains

Browse other domains in Aa_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyAa_trans(5051.1.1.6)

Pfam Families

PF01490Aa_trans

Transmembrane amino acid transporter protein

ClanCL0062APC

External Links

AlphaFold DB: Q42400 UniProt: Q42400

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-360,386-470