ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4KG50_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4KG50_F1_nD2

F4KG50_F1_nD2

UID: 003813849

AlphaFold

Range: 706-830
AlphaFold: AF-F4KG50
UniProt: F4KG50 (all domains)
Gene: SHOC1

Protein: Protein SHORTAGE IN CHIASMATA 1

3D Structure

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Related Domains

Browse other domains in DUF5587 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDUF5587(2004.1.1.700)

Pfam Families

PF17825SHOC1_ATPase

SHOC1 ATPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F4KG50 UniProt: F4KG50

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 706-830