ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8LCQ3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8LCQ3_F1_nD1

Q8LCQ3_F1_nD1

UID: 003815531

AlphaFold

Range: 6-115
AlphaFold: AF-Q8LCQ3
UniProt: Q8LCQ3 (all domains)
Gene: At5g08565

Protein: Transcription elongation factor SPT4 homolog 1

3D Structure

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Related Domains

Browse other domains in Spt4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySpt4(375.1.1.33)

Pfam Families

Spt4/RpoE2 zinc finger

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q8LCQ3 UniProt: Q8LCQ3

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115