ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q1PDX4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q1PDX4_F1_nD1

Q1PDX4_F1_nD1

UID: 003815564

AlphaFold

Range: 21-150
AlphaFold: AF-Q1PDX4
UniProt: Q1PDX4 (all domains)
Gene: At5g12340

Protein: DUF4228 domain protein

3D Structure

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Related Domains

Browse other domains in PADRE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyPADRE(221.1.1.82)

Pfam Families

PADRE domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q1PDX4 UniProt: Q1PDX4

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-150