ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9LS25_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9LS25_F1_nD3

Q9LS25_F1_nD3

UID: 003816680

AlphaFold

Range: 326-710
AlphaFold: AF-Q9LS25
UniProt: Q9LS25 (all domains)
Gene: At5g46580

Protein: Pentatricopeptide repeat-containing protein At5g46580, chloroplastic

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3, PPR_long →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3, PPR_long(109.4.1.1260)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

PF17177PPR_long

Pentacotripeptide-repeat region of PRORP

ClanCL0020TPR

External Links

AlphaFold DB: Q9LS25 UniProt: Q9LS25

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-710