ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2kqdA1 - ECOD Domain | ECOD

ECOD/Domains/e2kqdA1

e2kqdA1

UID: 000381769

PDB

Range: A:368-417
PDB: 2KQD chain A(all domains)
UniProt: Q8IW19 (all domains)
Gene: APLF

Molecule: Aprataxin and PNK-like factor

3D Structure

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Related Domains

Browse other domains in zf-CCHH →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupPBZ domain(3129)

HH-groupPBZ domain(3129.1)

TT-groupPBZ domain(3129.1.1)

FFamilyzf-CCHH(3129.1.1.1)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
alpha-D-ribofuranoseRIB
Zinc ionZN

Pfam Families

PF10283zf-CCHH

PBZ domain

External Links

ECOD PDB View: 2KQD RCSB PDB: 2KQD PDBe: 2KQD UniProt: Q8IW19

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.