ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0WVJ0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0WVJ0_F1_nD1

Q0WVJ0_F1_nD1

UID: 003817799

AlphaFold

Range: 11-155
AlphaFold: AF-Q0WVJ0
UniProt: Q0WVJ0 (all domains)
Gene: At5g12000

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in Usp →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyUsp(2005.1.1.3)

Pfam Families

Universal stress protein family

ClanCL0039HUP

External Links

AlphaFold DB: Q0WVJ0 UniProt: Q0WVJ0

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 11-155