ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O80958_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/O80958_F1_nD3

O80958_F1_nD3

UID: 003818260

AlphaFold

Range: 441-580
AlphaFold: AF-O80958
UniProt: O80958 (all domains)
Gene: LOJ

Protein: Pentatricopeptide repeat-containing protein At2g39230, mitochondrial (Protein LATERAL ORGAN JUNCTION)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_1, PPR_2, PPR_3, PPR_long →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_1, PPR_2, PPR_3, PPR_long(109.4.1.1274)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: O80958 UniProt: O80958

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-580

PF17177PPR_long

Pentacotripeptide-repeat region of PRORP

ClanCL0020TPR