ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O80958_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O80958_F1_nD2

O80958_F1_nD2

UID: 003818262

AlphaFold

Range: 306-440
AlphaFold: AF-O80958
UniProt: O80958 (all domains)
Gene: LOJ

Protein: Pentatricopeptide repeat-containing protein At2g39230, mitochondrial (Protein LATERAL ORGAN JUNCTION)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, TPR_24 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, TPR_24(109.4.1.1271)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat-containing protein

ClanCL0020TPR

External Links

AlphaFold DB: O80958 UniProt: O80958

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 306-440