ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wvdD1 - ECOD Domain | ECOD

ECOD/Domains/e2wvdD1

e2wvdD1

UID: 000381899

PDB

Range: D:8-52
PDB: 2WVD chain D(all domains)
UniProt: O25896 (all domains)
Gene: HP_1338

Molecule: PUTATIVE NICKEL-RESPONSIVE REGULATOR

3D Structure

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Related Domains

Browse other domains in RHH_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyRHH_1(101.1.11.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribbon-helix-helix protein, copG family

ClanCL0057Met_repress

External Links

ECOD PDB View: 2WVD RCSB PDB: 2WVD PDBe: 2WVD UniProt: O25896

Downloads

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