ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q7XJE6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q7XJE6_F1_nD1

Q7XJE6_F1_nD1

UID: 003819642

AlphaFold

Range: 16-45
AlphaFold: AF-Q7XJE6
UniProt: Q7XJE6 (all domains)
Gene: AMC1

Protein: Metacaspase-1 (AtMC1) (EC 3.4.22.-) (Metacaspase 1b) (AtMCP1b) (Protein LSD ONE LIKE 3)

3D Structure

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Related Domains

Browse other domains in zf-LSD1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzf-LSD1(375.1.1.200)

Pfam Families

PF06943zf-LSD1

LSD1 zinc finger

External Links

AlphaFold DB: Q7XJE6 UniProt: Q7XJE6

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-45