ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LIE1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LIE1_F1_nD1

Q9LIE1_F1_nD1

UID: 003820979

AlphaFold

Range: 16-80
AlphaFold: AF-Q9LIE1
UniProt: Q9LIE1 (all domains)
Gene: At3g22220

Protein: HAT transposon superfamily (Transposase-like protein)

3D Structure

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Related Domains

Browse other domains in zf-BED_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-BED_2(386.1.1.207)

Pfam Families

PF26664zf-BED_2

BED-like zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: Q9LIE1 UniProt: Q9LIE1

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-80