ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9T0I6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9T0I6_F1_nD4

Q9T0I6_F1_nD4

UID: 003822115

AlphaFold

Range: 1546-1780
AlphaFold: AF-Q9T0I6
UniProt: Q9T0I6 (all domains)
Gene: PRP8B

Protein: Pre-mRNA-processing-splicing factor 8B (PRP8 homolog B) (AtPRP8B)

3D Structure

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Related Domains

Browse other domains in U6-snRNA_bdg →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyU6-snRNA_bdg(2008.1.1.52)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

External Links

AlphaFold DB: Q9T0I6 UniProt: Q9T0I6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1546-1780