ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9T0I6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9T0I6_F1_nD5

Q9T0I6_F1_nD5

UID: 003822134

AlphaFold

Range: 1786-2060
AlphaFold: AF-Q9T0I6
UniProt: Q9T0I6 (all domains)
Gene: PRP8B

Protein: Pre-mRNA-processing-splicing factor 8B (PRP8 homolog B) (AtPRP8B)

3D Structure

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Related Domains

Browse other domains in PRP8_domainIV →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPRP8_domainIV(2484.1.1.62)

Pfam Families

PF12134PRP8_domainIV

PRP8 domain IV core

ClanCL0219RNase_H

External Links

AlphaFold DB: Q9T0I6 UniProt: Q9T0I6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1786-2060