ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LN01_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LN01_F1_nD1

Q9LN01_F1_nD1

UID: 003822725

AlphaFold

Range: 21-200
AlphaFold: AF-Q9LN01
UniProt: Q9LN01 (all domains)
Gene: PCMP-H12

Protein: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 82)

3D Structure

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Related Domains

Browse other domains in PPR_1, PPR_2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR_1, PPR_2(109.4.1.1257)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

External Links

AlphaFold DB: Q9LN01 UniProt: Q9LN01

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-200