ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3l25A1 - ECOD Domain | ECOD

ECOD/Domains/e3l25A1

e3l25A1

UID: 000382297

PDB

Range: A:218-340
PDB: 3L25 chain A(all domains)
UniProt: Q05127 (all domains)
Gene: VP35

Molecule: Polymerase cofactor VP35

3D Structure

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Related Domains

Browse other domains in Filo_VP35 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupPolymerase cofactor VP35 C-terminal RNA binding domain(3288)

HH-groupPolymerase cofactor VP35 C-terminal RNA binding domain(3288.1)

TT-groupPolymerase cofactor VP35 C-terminal RNA binding domain(3288.1.1)

FFamilyFilo_VP35(3288.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Sodium ionNA
metal

Pfam Families

PF02097Filo_VP35

Filoviridae VP35

External Links

ECOD PDB View: 3L25 RCSB PDB: 3L25 PDBe: 3L25 UniProt: Q05127

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.