ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q1JPM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q1JPM1_F1_nD1

Q1JPM1_F1_nD1

UID: 003824103

AlphaFold

Range: 31-230,356-510
AlphaFold: AF-Q1JPM1
UniProt: Q1JPM1 (all domains)
Gene: MPA24.11

Protein: At5g65760 (Lysosomal Pro-X carboxypeptidase) (Serine carboxypeptidase S28 family protein)

3D Structure

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Related Domains

Browse other domains in Peptidase_S28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPeptidase_S28(7579.1.1.28)

Pfam Families

PF05577Peptidase_S28

Serine carboxypeptidase S28

ClanCL0028AB_hydrolase

External Links

AlphaFold DB: Q1JPM1 UniProt: Q1JPM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-230,356-510