ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q56XI1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q56XI1_F1_nD2

Q56XI1_F1_nD2

UID: 003824591

RepresentativeAlphaFold

Range: 171-705
AlphaFold: AF-Q56XI1
UniProt: Q56XI1 (all domains)
Gene: PCMP-H18

Protein: Pentatricopeptide repeat-containing protein At1g09410, mitochondrial

3D Structure

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Related Domains

Browse other domains in PPR, PPR_1, PPR_2, DYW_deaminase, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_1, PPR_2, DYW_deaminase, E_motif(109.4.1.1476)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

PF14432DYW_deaminase

DYW family of nucleic acid deaminases

ClanCL0109CDA

External Links

AlphaFold DB: Q56XI1 UniProt: Q56XI1

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-705

PF20431E_motif

E motif

ClanCL0020TPR