ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q56XM9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q56XM9_F1_nD3

Q56XM9_F1_nD3

UID: 003825753

AlphaFold

Range: 336-450
AlphaFold: AF-Q56XM9
UniProt: Q56XM9 (all domains)
Gene: PAPS3

Protein: Nuclear poly(A) polymerase 3 (PAP(III)) (Poly(A) polymerase III) (EC 2.7.7.19) (Polynucleotide adenylyltransferase 3)

3D Structure

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Related Domains

Browse other domains in PAP_RNA-bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilyPAP_RNA-bind(304.20.1.1)

Pfam Families

PF04926PAP_RNA-bind

Poly(A) polymerase predicted RNA binding domain

External Links

AlphaFold DB: Q56XM9 UniProt: Q56XM9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 336-450