ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84W56_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q84W56_F1_nD4

Q84W56_F1_nD4

UID: 003828142

AlphaFold

Range: 821-900
AlphaFold: AF-Q84W56
UniProt: Q84W56 (all domains)
Gene: RNJ

Protein: Ribonuclease J (RNase J) (EC 3.1.-.-) (Protein EMBRYO DEFECTIVE 2746)

3D Structure

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Related Domains

Browse other domains in Myb_DNA-bind_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyMyb_DNA-bind_4(101.1.1.65)

Pfam Families

PF13837Myb_DNA-bind_4

Myb/SANT-like DNA-binding domain

ClanCL0123HTH

External Links

AlphaFold DB: Q84W56 UniProt: Q84W56

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 821-900