ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9T0I6_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q9T0I6_F1_nD6

Q9T0I6_F1_nD6

UID: 003832557

AlphaFold

Range: 2101-2340
AlphaFold: AF-Q9T0I6
UniProt: Q9T0I6 (all domains)
Gene: PRP8B

Protein: Pre-mRNA-processing-splicing factor 8B (PRP8 homolog B) (AtPRP8B)

3D Structure

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Related Domains

Browse other domains in JAB,PROCT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyJAB,PROCT(2492.1.1.3)

Pfam Families

JAB1/Mov34/MPN/PAD-1 ubiquitin protease

ClanCL0366JAB

PROCT (NUC072) domain

External Links

AlphaFold DB: Q9T0I6 UniProt: Q9T0I6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 2101-2340