ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O48700_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/O48700_F1_nD4

O48700_F1_nD4

UID: 003833449

AlphaFold

Range: 396-715,746-770
AlphaFold: AF-O48700
UniProt: O48700 (all domains)
Gene: PUB6

Protein: U-box domain-containing protein 6 (EC 2.3.2.27) (Plant U-box protein 6) (RING-type E3 ubiquitin transferase PUB6)

3D Structure

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Related Domains

Browse other domains in ARM_PUB →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyARM_PUB(109.4.1.1146)

Pfam Families

PF25598ARM_PUB

Plant U-box protein ARM repeat region

ClanCL0020TPR

External Links

AlphaFold DB: O48700 UniProt: O48700

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 396-715,746-770