ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k2pB1 - ECOD Domain | ECOD

ECOD/Domains/e3k2pB1

e3k2pB1

UID: 000383387

PDB

Range: B:427-557
PDB: 3K2P chain B(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Reverse Transcriptase

3D Structure

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Related Domains

Browse other domains in RNase_H →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_H(2484.1.1.4)

Ligands

in contact, ≤ 4 Å

2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-oneJTH
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00075RNase_H

RNase H

ClanCL0219RNase_H

External Links

ECOD PDB View: 3K2P RCSB PDB: 3K2P PDBe: 3K2P UniProt: P03366

Downloads

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