ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4KBP5_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/F4KBP5_F1_nD5

F4KBP5_F1_nD5

UID: 003833915

AlphaFold

Range: 921-1160,1216-1260
AlphaFold: AF-F4KBP5
UniProt: F4KBP5 (all domains)
Gene: CHR4

Protein: Protein CHROMATIN REMODELING 4 (AtCHR4) (EC 3.6.4.-) (Protein PICKLE RELATED 1)

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom, Helicase_C, HDA2-3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom, Helicase_C, HDA2-3(2004.1.1.428)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

Class II histone deacetylase complex subunits 2 and 3

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F4KBP5 UniProt: F4KBP5

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 921-1160,1216-1260