ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LT48_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9LT48_F1_nD2

Q9LT48_F1_nD2

UID: 003833958

AlphaFold

Range: 286-565
AlphaFold: AF-Q9LT48
UniProt: Q9LT48 (all domains)
Gene: PCMP-E94

Protein: Pentatricopeptide repeat-containing protein At3g20730

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_long, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_long, E_motif(109.4.1.1331)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

PF17177PPR_long

Pentacotripeptide-repeat region of PRORP

ClanCL0020TPR

PF20431E_motif

E motif

ClanCL0020TPR

External Links

AlphaFold DB: Q9LT48 UniProt: Q9LT48

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-565