ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0C896_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0C896_F1_nD1

P0C896_F1_nD1

UID: 003835622

AlphaFold

Range: 66-90,126-360
AlphaFold: AF-P0C896
UniProt: P0C896 (all domains)
Gene: At3g02650

Protein: Small ribosomal subunit protein mS80 (rPPR6) (Pentatricopeptide repeat-containing protein At3g02650, mitochondrial)

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR(109.4.1.420)

Pfam Families

PPR repeat

ClanCL0020TPR

External Links

AlphaFold DB: P0C896 UniProt: P0C896

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-90,126-360