ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O34491_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O34491_F1_nD2

O34491_F1_nD2

UID: 003838171

AlphaFold

Range: 171-365
AlphaFold: AF-O34491
UniProt: O34491 (all domains)
Gene: HP_0438

Protein: IS605 transposase (TnpB)

3D Structure

Loading viewer...

Related Domains

Browse other domains in OrfB_IS605, Cas12f1-like_TNB →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyOrfB_IS605, Cas12f1-like_TNB(2484.1.1.211)

Pfam Families

PF01385OrfB_IS605

Probable transposase

ClanCL0219RNase_H

PF07282Cas12f1-like_TNB

Cas12f1-like, TNB domain

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: O34491 UniProt: O34491

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-365