ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O34491_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O34491_F1_nD1

O34491_F1_nD1

UID: 003838172

AlphaFold

Range: 1-170
AlphaFold: AF-O34491
UniProt: O34491 (all domains)
Gene: HP_0438

Protein: IS605 transposase (TnpB)

3D Structure

Loading viewer...

Related Domains

Browse other domains in HTH_OrfB_IS605 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupSmall protein B (SmpB)(2.21)

TT-groupSmall protein B (SmpB)(2.21.1)

FFamilyHTH_OrfB_IS605(2.21.1.3)

Pfam Families

PF12323HTH_OrfB_IS605

Helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: O34491 UniProt: O34491

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-170