ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P56131_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P56131_F1_nD2

P56131_F1_nD2

UID: 003838264

AlphaFold

Range: 136-380
AlphaFold: AF-P56131
UniProt: P56131 (all domains)
Gene: miaB

Protein: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) ((Dimethylallyl)adenosine tRNA methylthiotransferase MiaB) (tRNA-i(6)A37 methylthiotransferase)

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

AlphaFold DB: P56131 UniProt: P56131

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-380