ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P56000_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/P56000_F1_nD6

P56000_F1_nD6

UID: 003838649

AlphaFold

Range: 811-870
AlphaFold: AF-P56000
UniProt: P56000 (all domains)
Gene: valS

Protein: Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)

3D Structure

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Related Domains

Browse other domains in Val_tRNA-synt_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-grouptRNA-binding arm(192.7)

TT-grouptRNA-binding arm(192.7.1)

FFamilyVal_tRNA-synt_C(192.7.1.4)

Pfam Families

PF10458Val_tRNA-synt_C

Valyl tRNA synthetase tRNA binding arm

ClanCL0298tRNA_bind_arm

External Links

AlphaFold DB: P56000 UniProt: P56000

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 811-870