ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O25845_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O25845_F1_nD2

O25845_F1_nD2

UID: 003839747

AlphaFold

Range: 26-80,186-300,561-590
AlphaFold: AF-O25845
UniProt: O25845 (all domains)
Gene: HP_1252

Protein: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (OppA)

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

AlphaFold DB: O25845 UniProt: O25845

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 26-80,186-300,561-590