ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P25444_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P25444_F1_nD1

P25444_F1_nD1

UID: 003840150

AlphaFold

Range: 51-175
AlphaFold: AF-P25444
UniProt: P25444 (all domains)
Gene: Rps2

Protein: Small ribosomal subunit protein uS5 (40S ribosomal protein S2) (40S ribosomal protein S4) (Protein LLRep3)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: P25444 UniProt: P25444

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 51-175