ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88520_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O88520_F1_nD1

O88520_F1_nD1

UID: 003845340

AlphaFold

Range: 71-330
AlphaFold: AF-O88520
UniProt: O88520 (all domains)
Gene: Shoc2

Protein: Leucine-rich repeat protein SHOC-2 (Protein soc-2 homolog) (Protein sur-8 homolog)

3D Structure

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Related Domains

Browse other domains in LRR_1+LRR_8+LRR_14 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1+LRR_8+LRR_14(207.1.1.102)

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

Leucine-rich repeat region

ClanCL0022LRR

External Links

AlphaFold DB: O88520 UniProt: O88520

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-330