ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ktmE2 - ECOD Domain | ECOD

ECOD/Domains/e3ktmE2

e3ktmE2

UID: 000384793

PDB

Range: E:26-123
PDB: 3KTM chain E(all domains)
UniProt: P05067 (all domains)
Gene: APP

Molecule: Amyloid beta A4 protein

3D Structure

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Related Domains

Browse other domains in APP_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupSRCR-like(358)

HH-groupA heparin-binding domain(358.2)

TT-groupA heparin-binding domain(358.2.1)

FFamilyAPP_N(358.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Amyloid A4 N-terminal heparin-binding

External Links

ECOD PDB View: 3KTM RCSB PDB: 3KTM PDBe: 3KTM UniProt: P05067

Downloads

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