ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ktmG1 - ECOD Domain | ECOD

ECOD/Domains/e3ktmG1

e3ktmG1

UID: 000384796

PDB

Range: G:124-190
PDB: 3KTM chain G(all domains)
UniProt: P05067 (all domains)
Gene: APP

Molecule: Amyloid beta A4 protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in APP_Cu_bd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupAmyloid beta a4 protein copper binding domain (domain 2)(872.2)

TT-groupAmyloid beta a4 protein copper binding domain (domain 2)(872.2.1)

FFamilyAPP_Cu_bd(872.2.1.1)

Ligands

in contact, ≤ 4 Å

(3R)-butane-1,3-diolBU4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12924APP_Cu_bd

Copper-binding of amyloid precursor, CuBD

External Links

ECOD PDB View: 3KTM RCSB PDB: 3KTM PDBe: 3KTM UniProt: P05067

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure