ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8BGA5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8BGA5_F1_nD2

Q8BGA5_F1_nD2

UID: 003849216

AlphaFold

Range: 136-235
AlphaFold: AF-Q8BGA5
UniProt: Q8BGA5 (all domains)
Gene: Krr1

Protein: KRR1 small subunit processome component homolog (HIV-1 Rev-binding protein 2 homolog) (KRR-R motif-containing protein 1)

3D Structure

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Related Domains

Browse other domains in KRR1-like_KH2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupKH-domains(327.11)

TT-groupEukaryotic type KH-domain (KH-domain type I)(327.11.2)

FFamilyKRR1-like_KH2(327.11.2.9)

Pfam Families

PF21800KH_KRR1_2nd

KRR1 small subunit processome component, second KH domain

ClanCL0007KH

External Links

AlphaFold DB: Q8BGA5 UniProt: Q8BGA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-235