ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ld0m1 - ECOD Domain | ECOD

ECOD/Domains/e3ld0m1

e3ld0m1

UID: 000384937

PDB

Range: m:201-253
PDB: 3LD0 chain m(all domains)
UniProt: Q65NU7 (all domains)
Gene: rtpA

Molecule: Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA

3D Structure

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Related Domains

Browse other domains in Anti-TRAP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupDnaJ/Hsp40 cysteine-rich domain(361)

HH-groupDnaJ/Hsp40 cysteine-rich domain(361.1)

TT-groupDnaJ/Hsp40 cysteine-rich domain(361.1.1)

FFamilyAnti-TRAP(361.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF15777Anti-TRAP

Tryptophan RNA-binding attenuator protein inhibitory protein

ClanCL0895DnaJ_CRD

External Links

ECOD PDB View: 3LD0 RCSB PDB: 3LD0 PDBe: 3LD0 UniProt: Q65NU7

Downloads

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