ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9JJF3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9JJF3_F1_nD2

Q9JJF3_F1_nD2

UID: 003859818

AlphaFold

Range: 471-600
AlphaFold: AF-Q9JJF3
UniProt: Q9JJF3 (all domains)
Gene: Riox1

Protein: Ribosomal oxygenase 1 (Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66) (EC 1.14.11.27, EC 1.14.11.79)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RIOX1_C_WH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRIOX1_C_WH(101.1.2.194)

Pfam Families

PF21233WHD_RIOX1

Ribosomal oxygenase 1, C-terminal winged helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q9JJF3 UniProt: Q9JJF3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 471-600