ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i5621 - ECOD Domain | ECOD

ECOD/Domains/e3i5621

e3i5621

UID: 000386151

PDB

Range: 2:1-49
PDB: 3I56 chain 2(all domains)
UniProt: P22452 (all domains)
Gene: rpl39e

Molecule: 50S ribosomal protein L39e

3D Structure

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Related Domains

Browse other domains in Ribosomal_L39 →

Classification

AArchitectureextended segments(a.20)

XX-groupRibosomal protein L39e(585)

HH-groupRibosomal protein L39e(585.1)

TT-groupRibosomal protein L39e(585.1.1)

FFamilyRibosomal_L39(585.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Sodium ionNA
metal
Strontium ionSR

Pfam Families

PF00832Ribosomal_L39

Ribosomal L39 protein

External Links

ECOD PDB View: 3I56 RCSB PDB: 3I56 PDBe: 3I56 UniProt: P22452

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.