ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88196_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O88196_F1_nD2

O88196_F1_nD2

UID: 003862743

AlphaFold

Range: 21-55,111-120,211-390,411-640
AlphaFold: AF-O88196
UniProt: O88196 (all domains)
Gene: Ttc3

Protein: E3 ubiquitin-protein ligase TTC3 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TTC3) (TPR repeat protein D) (Mtprd)

3D Structure

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Related Domains

Browse other domains in Iml2-TPR_39, TPR_8 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyIml2-TPR_39, TPR_8(109.4.1.1653)

Pfam Families

PF10300Iml2-TPR_39

Iml2/Tetratricopeptide repeat protein 39

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

AlphaFold DB: O88196 UniProt: O88196

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-55,111-120,211-390,411-640