ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lyrA1 - ECOD Domain | ECOD

ECOD/Domains/e3lyrA1

e3lyrA1

UID: 000386880

PDB

Range: A:21-237
PDB: 3LYR chain A(all domains)
UniProt: Q9UH73 (all domains)
Gene: EBF1

Molecule: Transcription factor COE1

3D Structure

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Related Domains

Browse other domains in COE1_DBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyCOE1_DBD(11.1.5.43)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Sulfate ion, Ammonium ion)

Sulfate ionSO4
DrugBank DB14546
Ammonium ion

Pfam Families

PF16422COE1_DBD

Transcription factor COE1 DNA-binding domain

ClanCL0073P53-like

External Links

ECOD PDB View: 3LYR RCSB PDB: 3LYR PDBe: 3LYR UniProt: Q9UH73

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.