ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m05C1 - ECOD Domain | ECOD

ECOD/Domains/e3m05C1

e3m05C1

UID: 000386889

PDB

Range: C:1-111
PDB: 3M05 chain C(all domains)
UniProt: Q03E61 (all domains)
Gene: PEPE_1480

Molecule: uncharacterized protein PEPE_1480

3D Structure

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Related Domains

Browse other domains in CdAMP_rec →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGlnB-like(304.5)

TT-groupGlnB-like(304.5.1)

FFamilyCdAMP_rec(304.5.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06153CdAMP_rec

Cyclic-di-AMP receptor

ClanCL0089GlnB-like

External Links

ECOD PDB View: 3M05 RCSB PDB: 3M05 PDBe: 3M05 UniProt: Q03E61

Downloads

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