ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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O88245_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O88245_F1_nD1

O88245_F1_nD1

UID: 003872306

AlphaFold

Range: 6-55
AlphaFold: AF-O88245
UniProt: O88245 (all domains)
Gene: Zfp1000

Protein: Mszf85 (Zinc finger protein 1000)

3D Structure

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Related Domains

Browse other domains in zf-C2H2+zf-C2H2_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2+zf-C2H2_4(386.1.1.133)

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

PF13894zf-C2H2_4

C2H2-type zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: O88245 UniProt: O88245

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-55