ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lm8D1 - ECOD Domain | ECOD

ECOD/Domains/e3lm8D1

e3lm8D1

UID: 000387245

PDB

Range: D:133-214
PDB: 3LM8 chain D(all domains)
UniProt: O34664 (all domains)
Gene: thiN

Molecule: Thiamine pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in TPK_B1_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupThiamin pyrophosphokinase, substrate-binding domain(10.11)

TT-groupThiamin pyrophosphokinase, substrate-binding domain(10.11.1)

FFamilyTPK_B1_binding(10.11.1.1)

Ligands

in contact, ≤ 4 Å

ThiamineVIB
drugDrugBank DB00152

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04265TPK_B1_binding

Thiamin pyrophosphokinase, vitamin B1 binding domain

External Links

ECOD PDB View: 3LM8 RCSB PDB: 3LM8 PDBe: 3LM8 UniProt: O34664

Downloads

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