ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m4pD1 - ECOD Domain | ECOD

ECOD/Domains/e3m4pD1

e3m4pD1

UID: 000387357

PDB

Range: D:11-117
PDB: 3M4P chain D(all domains)
UniProt: C4LWW8 (all domains)
Gene: EHI_126920

Molecule: Asparaginyl-tRNA synthetase, putative

3D Structure

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Related Domains

Browse other domains in tRNA_anti-codon →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_anti-codon(2.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01336tRNA_anti-codon

OB-fold nucleic acid binding domain

ClanCL0021OB

External Links

ECOD PDB View: 3M4P RCSB PDB: 3M4P PDBe: 3M4P UniProt: C4LWW8

Downloads

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