ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3km5B1 - ECOD Domain | ECOD

ECOD/Domains/e3km5B1

e3km5B1

UID: 000387600

PDB

Range: B:1157-1332
PDB: 3KM5 chain B(all domains)
UniProt: P59915 (all domains)
Gene: hagA

Molecule: Lysine specific cysteine protease

3D Structure

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Related Domains

Browse other domains in Cleaved_Adhesin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyCleaved_Adhesin(10.1.1.24)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 3 additives (Glycerin, Nitrate, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

PF07675Cleaved_Adhesin

Cleaved Adhesin Domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3KM5 RCSB PDB: 3KM5 PDBe: 3KM5 UniProt: P59915

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.