ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ljtA1 - ECOD Domain | ECOD

ECOD/Domains/e3ljtA1

e3ljtA1

UID: 000387638

PDB

Range: A:263-480
PDB: 3LJT chain A(all domains)
UniProt: Q9UNA0 (all domains)
Gene: ADAMTS5

Molecule: A disintegrin and metalloproteinase with thrombospondin motifs 5

3D Structure

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Related Domains

Browse other domains in Reprolysin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyReprolysin(2498.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(2R)-2-[4-(1,3-benzodioxol-5-yl)benzyl]-N~4~-hydroxy-N~1~-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]butanediamideLA3
Zinc ionZN

Pfam Families

PF01421Reprolysin

Reprolysin (M12B) family zinc metalloprotease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3LJT RCSB PDB: 3LJT PDBe: 3LJT UniProt: Q9UNA0

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.