ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6DBY0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6DBY0_F1_nD1

Q6DBY0_F1_nD1

UID: 003878431

AlphaFold

Range: 11-645
AlphaFold: AF-Q6DBY0
UniProt: Q6DBY0 (all domains)
Gene: nup85

Protein: Nuclear pore complex protein Nup85 (85 kDa nucleoporin) (Nucleoporin Nup85) (Pericentrin-1)

3D Structure

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Related Domains

Browse other domains in Nucleopor_Nup85 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilyNucleopor_Nup85(109.21.1.1)

Pfam Families

PF07575Nucleopor_Nup85

Nup85 Nucleoporin

ClanCL0020TPR

External Links

AlphaFold DB: Q6DBY0 UniProt: Q6DBY0

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 11-645